Grabware

Windows · Developer Tools

Cytoscape

An open source platform for network analysis and visualization

Version 3.10.5 · by Cytoscape Consortium

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Official site: cytoscape.org

About Cytoscape

Cytoscape is an open source software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data. Although Cytoscape was originally designed for biological research, now it is a general platform for complex network analysis and visualization. Cytoscape core distribution provides a basic set of features for data integration, analysis, and visualization. Additional features are available as Apps (formerly called Plugins). Apps are available for network and molecular profiling analyses, new layouts, additional file format support, scripting, and connection with databases.

## Core features

* Supports many standards

* Public Database clients

* Interoperability

* Session files

* Layouts

* Image export

* VizMapper

* Filters

* Search

* Browsing

* Find modules/clusters

* App manager and App store

* Export to web

* Multilingual.

How to install Cytoscape

  1. Click Download — the developer's official website opens in a new tab.
  2. Download the latest version there and run it. Choose Custom/Advanced where offered, and skip any bundled extras.
  3. Prefer the command line? With Chocolatey you can install and update it with: choco install cytoscape
  4. Open Cytoscape once it finishes installing.
How to install Windows software with Chocolatey

Frequently asked questions

Is Cytoscape free to download?

Yes. The Download button sends you to cytoscape.org, the developer's official site, where Cytoscape is available to download. Grabware doesn't host or modify any files.

What is the latest version of Cytoscape?

The version listed here is 3.10.5, published /Date(1792. The developer's site always has the newest release.

How do I install Cytoscape from the command line?

With Chocolatey, run: choco install cytoscape. This installs it from the official source and keeps it updated.

Is Cytoscape safe?

Cytoscape downloads directly from the developer. As always, scan the installer with your antivirus and choose Custom setup to skip any bundled extras.

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